The Human Transcript Database: a catalogue of full length cDNA inserts

The Human Transcript Database: a catalogue of full length cDNA inserts

SUMMARY Full length cDNA sequences are an important resource for the research community but are currently intermingled with other sequences. We have identified the human full length insert cDNA sequences in GenBank and placed them in a single location, the Human Transcript Database. AVAILIBILITY: The Human Transcript Database is available at http://www.hgsc.bcm.tms.edu/HTDB/. CONTACT John Bou...

An Integrated Database System for Full-Length Human cDNA in NEDO Full-Length Human cDNA Sequencing Project

Construction and Application of Mouse Full-length cDNA Database

Our group has been making effort to collect mouse full-length cDNA clones as large scale Mouse cDNA project. It is aiming at collecting all kind of expressed full-length Mouse cDNA clones. The first phase of the project is to make cataloged non-redundant cDNA clone bank. It is necessary for analysis of sequence data and further applications of cDNA clones. We sequence 3’-end part of all cDNA cl...

An integrated analysis and database system for full-length cDNA.

Annotation and database system of full-length cDNA sequences was developed. As the components of the system, ORF annotation system, functional annotation system based on database search results, mapping annotation system, and integrated retrieval and display system were developed. In the ORF annotation system integrated analyses using conventional tools are performed and useful retrieval interf...

FULL-malaria: a database for a full-length enriched cDNA library from human malaria parasite, Plasmodium falciparum

FULL-malaria is a database for a full-length-enriched cDNA library from the human malaria parasite Plasmodium falciparum (http://133.11. 149.55/). Because of its medical importance, this organism is the first target for genome sequencing of a eukaryotic pathogen; the sequences of two of its 14 chromosomes have already been determined. However, for the full exploitation of this rapidly accumulat...